MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
19428wB2_HT4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 288
bases: 2,382,433 bps
CDS: 2,042
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 2,093
Total number of protein coding genes annotated/found:
2,042
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5042|JADGLI010000001.1
SEQF5042_00652
Genome Viewer
NA
AA
945/315
157898-158842
Mannose-6-phosphate isomerase ManA
SEQF5042|JADGLI010000001.1
SEQF5042_00651
Genome Viewer
NA
AA
882/294
156808-157689
Putative fructokinase
SEQF5042|JADGLI010000001.1
SEQF5042_00650
Genome Viewer
NA
AA
1914/638
154803-156716
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00649
Genome Viewer
NA
AA
1455/485
154575-153121
Sucrose-6-phosphate hydrolase
SEQF5042|JADGLI010000001.1
SEQF5042_00648
Genome Viewer
NA
AA
963/321
153140-152178
HTH-type transcriptional regulator DegA
SEQF5042|JADGLI010000001.1
SEQF5042_00647
Genome Viewer
NA
AA
453/151
151418-151870
Transcription antitermination protein NusB
SEQF5042|JADGLI010000001.1
SEQF5042_00646
Genome Viewer
NA
AA
393/131
151036-151428
putative protein
SEQF5042|JADGLI010000001.1
SEQF5042_00645
Genome Viewer
NA
AA
561/187
150448-151008
Elongation factor P
SEQF5042|JADGLI010000001.1
SEQF5042_00644
Genome Viewer
NA
AA
1062/354
149323-150384
Aminopeptidase YpdF
SEQF5042|JADGLI010000001.1
SEQF5042_00643
Genome Viewer
NA
AA
123/41
149024-149146
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00642
Genome Viewer
NA
AA
162/54
148782-148943
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00641
Genome Viewer
NA
AA
825/275
147948-148772
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00639
Genome Viewer
NA
AA
198/66
144237-144434
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00638
Genome Viewer
NA
AA
1245/415
142950-144194
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00637
Genome Viewer
NA
AA
1326/442
141595-142920
6-phospho-alpha-glucosidase
SEQF5042|JADGLI010000001.1
SEQF5042_00636
Genome Viewer
NA
AA
1554/518
140024-141577
PTS system maltose-specific EIICB component
SEQF5042|JADGLI010000001.1
SEQF5042_00635
Genome Viewer
NA
AA
789/263
139220-140008
Carbohydrate deacetylase
SEQF5042|JADGLI010000001.1
SEQF5042_00634
Genome Viewer
NA
AA
714/238
139057-138344
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00633
Genome Viewer
NA
AA
945/315
137777-136833
hypothetical protein
SEQF5042|JADGLI010000001.1
SEQF5042_00632
Genome Viewer
NA
AA
654/218
136815-136162
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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